 Craig Smail, PhD
| Title | Computational Research Faculty |
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| Institution | Children's Mercy Kansas City |
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| Department | Pediatrics |
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| Address | 2401 Gilham Rd
Kansas City MO 64108
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ORCID
.gif) | 0000-0001-8045-6021  |
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| vCard | Download vCard |
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| Title | Assistant Professor of Pediatrics |
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| Institution | University of Missouri-Kansas City |
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| Department | Pediatrics |
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| Title | Research Assistant Professor of Pediatrics |
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| Institution | University of Kansas Medical Center |
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| Department | Pediatrics |
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 Biography | Stanford University, Stanford, CA | PhD | 2020 | Biomedical Informatics |
| 2017 - 2018 | Teaching Award, Stanford University | | 2019 - 2019 | Fellowship, Stanford | EMBL Life Science Alliance |
Overview Research Craig is a faculty member and group leader within the Genomic Medicine Center and the Department of Pediatrics at Children’s Mercy Hospital, Kansas City, MO and an Assistant Professor of Pediatrics at the University of Missouri - Kansas City School of Medicine, Kansas City, MO with a secondary appointment at University of Kansas School of Medicine, Kansas City, KS. His main research focus is in understanding how rare human genetic variation affects disease risk. In pursuit of this goal, his laboratory focuses on novel computational and statistical approaches to rare variant interpretation using large-scale functional genomics data from somatic and developmental cell types.
Bibliography
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Teran NA, Nachun DC, Eulalio T, Ferraro NM, Smail C, Rivas MA, Montgomery SB. Nonsense-mediated decay is highly stable across individuals and tissues. Am J Hum Genet. 2021 Jun 29. PMID: 34216550.
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de Goede OM, Nachun DC, Ferraro NM, Gloudemans MJ, Rao AS, Smail C, Eulalio TY, Aguet F, Ng B, Xu J, Barbeira AN, Castel SE, Kim-Hellmuth S, Park Y, Scott AJ, Strober BJ, Brown CD, Wen X, Hall IM, Battle A, Lappalainen T, Im HK, Ardlie KG, Mostafavi S, Quertermous T, Kirkegaard K, Montgomery SB. Population-scale tissue transcriptomics maps long non-coding RNAs to complex disease. Cell. 2021 May 13; 184(10):2633-2648.e19. PMID: 33864768.
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Bonder MJ, Smail C, Gloudemans MJ, Frésard L, Jakubosky D, D'Antonio M, Li X, Ferraro NM, Carcamo-Orive I, Mirauta B, Seaton DD, Cai N, Vakili D, Horta D, Zhao C, Zastrow DB, Bonner DE, Wheeler MT, Kilpinen H, Knowles JW, Smith EN, Frazer KA, Montgomery SB, Stegle O. Identification of rare and common regulatory variants in pluripotent cells using population-scale transcriptomics. Nat Genet. 2021 03; 53(3):313-321. PMID: 33664507.
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Ferraro NM, Strober BJ, Einson J, Abell NS, Aguet F, Barbeira AN, Brandt M, Bucan M, Castel SE, Davis JR, Greenwald E, Hess GT, Hilliard AT, Kember RL, Kotis B, Park Y, Peloso G, Ramdas S, Scott AJ, Smail C, Tsang EK, Zekavat SM, Ziosi M, Ardlie KG, Assimes TL, Bassik MC, Brown CD, Correa A, Hall I, Im HK, Li X, Natarajan P, Lappalainen T, Mohammadi P, Montgomery SB, Battle A. Transcriptomic signatures across human tissues identify functional rare genetic variation. Science. 2020 09 11; 369(6509). PMID: 32913073.
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Loskutova NY, Lutgen C, Smail C, Staton EW, Nichols SD, Pinckney RG. Stimulant Prescribing Error Assessment Rubric Development. J Patient Saf. 2020 Sep 08. PMID: 32925567.
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Jakubosky D, D'Antonio M, Bonder MJ, Smail C, Donovan MKR, Young Greenwald WW, Matsui H, D'Antonio-Chronowska A, Stegle O, Smith EN, Montgomery SB, DeBoever C, Frazer KA. Properties of structural variants and short tandem repeats associated with gene expression and complex traits. Nat Commun. 2020 06 10; 11(1):2927. PMID: 32522982.
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Loskutova NY, Smail C, Callen E, Staton EW, Nazir N, Webster B, Pace WD. Effects of multicomponent primary care-based intervention on immunization rates and missed opportunities to vaccinate adults. BMC Fam Pract. 2020 02 29; 21(1):46. PMID: 32113475.
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Frésard L, Smail C, Ferraro NM, Teran NA, Li X, Smith KS, Bonner D, Kernohan KD, Marwaha S, Zappala Z, Balliu B, Davis JR, Liu B, Prybol CJ, Kohler JN, Zastrow DB, Reuter CM, Fisk DG, Grove ME, Davidson JM, Hartley T, Joshi R, Strober BJ, Utiramerur S, Lind L, Ingelsson E, Battle A, Bejerano G, Bernstein JA, Ashley EA, Boycott KM, Merker JD, Wheeler MT, Montgomery SB. Identification of rare-disease genes using blood transcriptome sequencing and large control cohorts. Nat Med. 2019 06; 25(6):911-919. PMID: 31160820.
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Anand S, Kalesinskas L, Smail C, Tanigawa Y. SNPs2ChIP: Latent Factors of ChIP-seq to infer functions of non-coding SNPs. Pac Symp Biocomput. 2019; 24:184-195. PMID: 30864321.
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Merker JD, Devereaux K, Iafrate AJ, Kamel-Reid S, Kim AS, Moncur JT, Montgomery SB, Nagarajan R, Portier BP, Routbort MJ, Smail C, Surrey LF, Vasalos P, Lazar AJ, Lindeman NI. Proficiency Testing of Standardized Samples Shows Very High Interlaboratory Agreement for Clinical Next-Generation Sequencing-Based Oncology Assays. Arch Pathol Lab Med. 2019 04; 143(4):463-471. PMID: 30376374.
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Loskutova NY, Smail C, Ajayi K, Pace WD, Fox CH. Recruiting primary care practices for practice-based research: a case study of a group-randomized study (TRANSLATE CKD) recruitment process. Fam Pract. 2018 01 16; 35(1):111-116. PMID: 28985294.
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Loskutova N, Smail C, Webster B, Ajayi K, Wood J, Carroll J. Missed opportunities for improving practice performance in adult immunizations: a meta-narrative review of the literature. BMC Fam Pract. 2017 12 22; 18(1):108. PMID: 29272999.
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| 2017 | 1 | | 2018 | 2 | | 2019 | 2 | | 2020 | 4 | | 2021 | 3 |
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