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Cheung, Warren

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research overview

Dr. Cheung’s research interests involve exploring the elegance of computational algorithms, focused in the myriad of diverse application domains of bioinformatics. His current ongoing projects involve high-throughput epigenomics datasets and associated data, interrogating the interplay between the genome, methylome, transcriptome, chromatin histone mark deposition and accessibility. Dr. Cheung previously worked on the epigenomics of pediatric glioblastomas, and his interests have also ranged as far as the inference of novel associations from medical subject annotations in the PubMed biomedical database, privacy in epigenomics and medical image analysis. He is currently focusing on simultaneous aggregate analysis of multiple single-cell transcriptomics from the 10X platforms, and bridging this with methylation and other datasets in human blood immune cell types.

One or more keywords matched the following items that are connected to Cheung, Warren

Item Type	Name
Concept	Genome, Human
Concept	Genome
Concept	Genome-Wide Association Study
Academic Article	Epigenome data release: a participant-centered approach to privacy protection.
Academic Article	Whole-genome sequencing identifies EN1 as a determinant of bone density and fracture.
Academic Article	Population whole-genome bisulfite sequencing across two tissues highlights the environment as the principal source of human methylome variation.
Academic Article	Functional variation in allelic methylomes underscores a strong genetic contribution and reveals novel epigenetic alterations in the human epigenome.
Academic Article	Dissecting features of epigenetic variants underlying cardiometabolic risk using full-resolution epigenome profiling in regulatory elements.
Academic Article	Inferring novel gene-disease associations using Medical Subject Heading Over-representation Profiles.
Academic Article	Gene characterization index: assessing the depth of gene annotation.
Academic Article	The transcription factor encyclopedia.
Academic Article	Correction to: Functional variation in allelic methylomes underscores a strong genetic contribution and reveals novel epigenetic alterations in the human epigenome.
Academic Article	Genomic answers for children: Dynamic analyses of >1000 pediatric rare disease genomes.
Academic Article	Direct haplotype-resolved 5-base HiFi sequencing for genome-wide profiling of hypermethylation outliers in a rare disease cohort.
Academic Article	Characterization and visualization of tandem repeats at genome scale.

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Genome